io.github.unibio-intelligence/biomedmcp · v0.2.4 · health-and-science
biomedmcp is healthy: it completed an MCP handshake in 1327 ms and exposes 13 tools.
Integrated public biomedical research with cited, bounded evidence.
Endpoint: https://biomedmcp.unibiointelligence.com/mcp (streamable-http)
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| Users (last 30 days) | 0 |
| Handshake | Healthy |
| Auth needed | None |
| Tool count | 13 |
| Latency | 1327 ms |
| Last checked (UTC) | 2026-11-05T08:55:49.120Z |
| Checked (UTC) | Status | Latency | Error |
|---|---|---|---|
| 2026-11-05T08:55:49.120Z | Healthy | 1327 |
search | Find ordinary records with entity filters. Papers use literature_search; trials use trial_search. e.g. {"entity":"gene","query":"BRCA1","filters":{"species":9606}}; biomedmcp://guide |
get | Read ordinary records/evidence sections; variants use variant_evidence. Sources constrain all lookups and identity dependencies. e.g. {"entity":"gene","id":"BRAF","species":9606}; biomedmcp://guide |
literature_search | Find papers with publication/topic/source filters; deduplicate evidence and retain source outcomes and opaque continuation. e.g. {"query":"KRAS resistance"}; biomedmcp://guide |
trial_search | Find public clinical trials using disease/intervention and trial-specific filters. Does not determine individual clinical eligibility. e.g. {"query":"melanoma","filters":{"status":"RECRUITING"}}; biomedmcp://guide |
variant_evidence | Retrieve variant evidence with assembly/transcript ambiguity preserved. Defaults: ClinVar, population, CIViC. Request predictions for AlphaMissense, or eve for MIT-licensed EVE protein scores; computational predictions retain source and uncertainty. e.g. {"id":"BRAF V600E"}; biomedmcp://guide |
study_analysis | Analyze an installed verified public study. Bundled ubi_synthetic is an invented demo; discover installed releases with capabilities(source=study). Report clinical and assayed samples separately, unique mutant samples, events and exclusions. Preserve input hashes and denominators. Private compute us |
resolve | Resolve aliases/ambiguity before evidence joins. One exact species-qualified symbol/ID resolves; provider score alone never establishes identity. Retrieve known unambiguous identifiers directly. e.g. {"entity":"gene","query":"HER2","species":9606}; biomedmcp://guide |
relate | Traverse an evidence relationship. Relations: gene/drug/disease: articles,trials; variant: articles,structure; article: citations,references,recommendations,authors,entities; author: articles. e.g. {"entity":"article","id":"PMID:123","relation":"references"}; biomedmcp://guide |
research | Dossiers retain citations/outcomes. Inspect capabilities and get further sections for completeness. e.g. {"workflow":"target_dossier","focus":"ERBB2","species":9606}; biomedmcp://guide |
query_source | Run advanced source operations after checking capabilities/schema. Common tasks have dedicated tools. e.g. {"source":"gtex","operation":"get_metadata","params":{"info_type":"tissues","dataset_id":"gtex_v10"}}; biomedmcp://guide |
batch | Execute up to ten independent read operations with one atomic quota reservation. e.g. {"calls":[{"operation":"get","arguments":{"entity":"gene","id":"BRAF","species":9606}}]}; biomedmcp://guide |
capabilities | Inspect enabled sources, workflows, sections or an advanced operation's exact schema. e.g. {}; biomedmcp://guide |
quota | Inspect current research allowance and reset times; sign in for higher limits. e.g. {}; biomedmcp://guide |